Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQMYYAMKANSERTILDTISQYVEGFEVASQGEI----AKGLAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQ-FEWDNFVENFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGA-WYAILRGGTQQFRLPVSWQHNHPFEIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIYLTQTKEDE |
| 2PLJ Chain:A ((45-396)) | --LIEASVEQFGA---PL--LLLDCDVIRQQYRALKNALP-NVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVELVASEGV---PADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVE----LLVRLS----F----------SKKFGCSPEQALVIIETAKEW-NIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNY---TQQVMPIDQFCAPINEAL-SLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSF-------SGLMFDDARY---PLTTIKQGGELIPSVLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAY-TSATATDF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227797 for 2801 contacts (-81.3/contact) +
2D Compatibility (PS) -36271 + (NN) -11941 + (LL) 3312
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -297797.0 ( -106.32 by residue)
QMean score : 0.440
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