Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFYNILGVLILVMLSTDALDCDIITHLRTSLINFLPIQSLLSALKNPYC
3QX3 Chain:A ((135-234))
-------------MIMTDQ-DQDGS-HIKGLLINFI--------------
General information:
TITO was launched using:
RESULT:
Template:
3QX3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7224 for 86 contacts (-84.0/contact) +
2D Compatibility (PS) -2132 + (NN) 200 + (LL) 2728
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -8528.0 ( -99.16 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_3QX3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QX3-query.scw
PDB file :
Tito_Scwrl_3QX3.pdb
: