Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYPIKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFI-GPRPERPEFVELFSSEVIGFEQR-CLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR |
| 3FK4 Chain:A ((87-143)) | ------------------------------------------------------------------------------------------------------------------------------------PDLPAILTTTFGKLSLDGEVKLIDLTFSDE-------LKKHFPGPKFGIDGIRNLLQV------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221 for 203 contacts (-1.1/contact) +
2D Compatibility (PS) -5340 + (NN) -1931 + (LL) 14400
1D Compatibility (HY) -800 + (ID) 350
Total energy: 5758.0 ( 28.36 by residue)
QMean score : -0.070
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