Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSDSLKENIIYQGLYQL---IRTMTPLITIPIISRAFG-PSGVGIVSFSFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLFLALTVFAMYMVVI--TIFIDDYYLIFLLQGIYIIGAALDISWFYAGTEKFKIPSLSNIVASGIVLS---VVVIFVKDQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPNGQLNLYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIM--INTFDLVMIPRITKM---SIQQSHSLTKTLANNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLII--PLNMLISRQYLLIVNKIR------------------LYNASITIGAVMNLVLCLVLIYFYGIY-GAAIAR-LITEFILLIWRFVDITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIVVYLLLMMTMKNQYVWQILRHLRHKTI |
| 4UQU Chain:A ((1-462)) | AEKEKNAAEIRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGEVKPWFLSAYDEKVRQIENGENGPKMKAK--------NVGEARAGRALEAAGWTLDINYGNIYPNRFFMLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAARMAGADLVGVARLNRNWVYSEAVTIPADVPYEQS-LHKEIEKPIVFKDVPLP-----IETDDELIIPN------TCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMFDMWLCQFIRYMGYYAIPSCNGVGQSVAFAVEAGLGQASRM---GACITP---------EFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSIHNQSGKLQWQNDYNKCLGYWPESGGYCGVCVAVCPFTKGNIWIHDGVEWLIDNTR-NITEVWD------------GKINTY------------------------GLDADHFRDTVSFRKDRVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -451167 for 3321 contacts (-135.9/contact) +
2D Compatibility (PS) -41150 + (NN) 8486 + (LL) 7836
1D Compatibility (HY) -1200 + (ID) 3400
Total energy: -480595.0 ( -144.71 by residue)
QMean score : 0.188
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