Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIKQEVRESIVKGIIAGYKDYVNE--RNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKENAGPSWKYLKFIFNKDEEKNNIMFILKNEDYFDEKNVSVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDYHIDEEELEVLKNDGELELIDVEHAFGISIDEGNDMIESER |
4UER Chain:I ((79-111)) | -------IRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2955 for 148 contacts (-20.0/contact) +
2D Compatibility (PS) -3264 + (NN) -856 + (LL) 15968
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 6643.0 ( 44.89 by residue)
QMean score : 0.374
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