Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
3BFV Chain:B ((16-41)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKRIKDEEDVEKELGLPVLGSIQKFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120 for 96 contacts (-1.2/contact) +
2D Compatibility (PS) -2726 + (NN) -516 + (LL) 16584
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: 8722.0 ( 90.85 by residue)
QMean score : 0.722
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