Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRY-TTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQI--LNDIDRKVITGINDSRYLLIEFPSN-----EVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYED-MNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL |
1M65 Chain:A ((3-230)) | PVDLHMHTVA-STHAYSTLS---DYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFIN-----MR-IWPRVVDGVGILRGIEANIKNVDGEIDCSG--K--MFDSLDLIIAGFHEPVFAPHDKATNTQAMIA-TIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSS-------NCREVAAAVRDAGGWVALGSDSHTAFTMG-EFEECLKILD--AVDFPPERILNVSPRRLLNF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38876 for 1782 contacts (-21.8/contact) +
2D Compatibility (PS) -21745 + (NN) -5662 + (LL) 3048
1D Compatibility (HY) -1600 + (ID) 1400
Total energy: -66235.0 ( -37.17 by residue)
QMean score : 0.283
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