Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTIYTIITITSVVLGNTLNNIRLINMNLYKSNHYYWKFVSILLISILIESIALIIVFLYFFNLNTIDIIFLILLNILMCLRIYLNVF-FRMTLKYNQILYIALIQFLGLLIGLFLYYLIQNWIVCFITSELFATIYTLVKLRGLTIGEYQSEDNNVVKDYVMLLSTNSLNNLNLYLDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPIN---NVVLSYISVNESDNIKKQYLKTNLFAIAALCLVMIICYPI------TLIIVSLLYNIDSSLYSKFIILGNIGVLFNAVSIMIQTLNTKHASITLQANYMTLHTITFIFITILMTIAFGLNGFFWTTLFSNIIKYVILNII--GLKSKFINKKDVD |
| 4K6N Chain:A ((32-383)) | PNFEVLATFRYDPGFARQ---SASKKEIFETPDPRLGLR---DEDIRQQIINEDYSSYLRVREVNS-----GGDLLENIQ---------HPDAWKHDCKTIVCQRVEDMLQVIYERFFL-----------LDEQYQRIRIALSYFKIDFSTSLNDLLKLLVENLINCKEG---------------NSEYHEKIQKMINER---------------QCYKMRVLVSKTGDIRIEAIPMPMEPILKLTTDYDSVSTYFIKTMLNGFLIDSTINWDVVVSSEPLNASAFTSFKTTSRDHYARARVRMQTAINNLRGSEPTSSVSQCEILFSNKSGL----LMEGSI----TNVAVIQKDPNGSKKYVTPRLATGCLCG---TMRHYLLRLGLIEEGDIDIGSLTVGNEVLLFNGVMGCIKGTVKTKY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -418075 for 2473 contacts (-169.1/contact) +
2D Compatibility (PS) -32879 + (NN) 8692 + (LL) 7116
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -446946.0 ( -180.73 by residue)
QMean score : 0.195
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