Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVST-----TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIENL-GFTIGEDICLVHCPERVLPGKILEELVHNNRIIGGV-TKACIEAGKYVYRTFVQG--EMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVN--IHQPGPGVGGHCLAVDPYFIIAKDPENA---KLIQTGREINNSMPAYVVDTTKQIIKA-LSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDP------HVEL-DFVEH--DMSHAVKDASLVLILSDHSEFKNLSDSHFDK-MKHKVIFDTKNVVK-SSFEDVSYYNYGNIFNFIDK |
| 3GG2 Chain:A ((3-436)) | LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA-DIIFIAVGTPAGEDG--SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYRMEVLEAVERVNEKQKSILFDKFSTYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKL-LEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTEWKEFRMPDWSALSQAMAASLVIDGRNVYELP----FTLLNIG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244735 for 3382 contacts (-72.4/contact) +
2D Compatibility (PS) -42978 + (NN) -6834 + (LL) 716
1D Compatibility (HY) -30400 + (ID) 5800
Total energy: -330031.0 ( -97.58 by residue)
QMean score : 0.562
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