Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCLNFREDNVMKKIMVIFGTRPEAIKMAPLVKEIDHNGNFEANIVITAQHRDM-LDSVLSIFDIQADHDLNIMQDQQTL---ADLTANALA----KLDSIINEEQPDMILVHGDTTTTFVGSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIAAKNLLFENKDKERIFITGNTVIDALSTTVQNDFVSTIINKHK--GKKVILLTAHRRENIGEPMHQIFKAVRDLADEYKDVVFIYPMHRNPKVRAIAEKYLSGRNRIELIEPLDAIEFHNFTNQSYLVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQLIEDDEAYQRMSQANNPYGD-GQASRRICEAIEYYFGLRSDKPDEFVPLRHK |
| 4HWG Chain:A ((9-373)) | ----------MLKVMTIVGTRPELIKLCCVISEFDKHT--KHILVHTGQNYAYELNQVF--FD------MGIRKPDYFLEVAADNTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSC-LSAIAAKRRKIPIFHMEAGNRCFDQR--VPEEINRKIIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSHRE---KNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIREAHERPEGMDAGTLIMSGFKAERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSY----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126098 for 2920 contacts (-43.2/contact) +
2D Compatibility (PS) -37457 + (NN) -12898 + (LL) 2164
1D Compatibility (HY) -22800 + (ID) 5100
Total energy: -202189.0 ( -69.24 by residue)
QMean score : 0.431
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