Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKK-YEGDDYQAIDQVSSLLKEKY-GIAHSTLQIENLQLNPLDEPYFDKLT |
3W61 Chain:A ((5-82)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAVQNRIVEAAERVPGVRGVIHLRARYVGQ-DIWADMIIGVDPENTVEQAHEICEAVQAAVCGKIRRIESLAVSAEARE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42807 for 520 contacts (-82.3/contact) +
2D Compatibility (PS) -8057 + (NN) 1551 + (LL) 22212
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -29101.0 ( -55.96 by residue)
QMean score : 0.675
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