Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAHMTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDIDLNDDEVISIFVFDKSIE
3EJ9 Chain:B ((14-44))
----ARKQQLIRDVIDVTNKSIGSDPKIINVLLVE---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6079 for 130 contacts (46.8/contact) +
2D Compatibility (PS) -3608 + (NN) -3228 + (LL) 6928
1D Compatibility (HY) -2000 + (ID) 350
Total energy: 3821.0 ( 29.39 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3EJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EJ9-query.scw
PDB file :
Tito_Scwrl_3EJ9.pdb
: