Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
| 2K1A Chain:A ((968-990)) | -----------------------------------------------------------------WVLVGVLGGLLLLTILVLAMWKV--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11438 for 88 contacts (-130.0/contact) +
2D Compatibility (PS) -2240 + (NN) 708 + (LL) 16664
1D Compatibility (HY) -3200 + (ID) 50
Total energy: 444.0 ( 5.05 by residue)
QMean score : 0.258
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