Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPEEKGSITLSK-----EAAIIFATAKFKPFKNRIKNNPLKTNPFLKLHENKKS
1Y2Y Chain:A ((11-37))
----GKRIYTLKKVTESGEITKSAHPARFSP------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Y2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1721 for 73 contacts (-23.6/contact) +
2D Compatibility (PS) -2073 + (NN) 1387 + (LL) 1336
1D Compatibility (HY) 0 + (ID) 400
Total energy: -1471.0 ( -20.15 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1Y2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y2Y-query.scw
PDB file :
Tito_Scwrl_1Y2Y.pdb
: