Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPVTTSRYQGGAHRG
2V40 Chain:A ((60-81))
-----VCRCQGGNNA-
General information:
TITO was launched using:
RESULT:
Template:
2V40.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 377 for 22 contacts (17.1/contact) +
2D Compatibility (PS) -1073 + (NN) -433 + (LL) 112
1D Compatibility (HY) -400 + (ID) 200
Total energy: -1617.0 ( -73.50 by residue)
QMean score : 0.923
(partial model without unconserved sides chains):
PDB file :
Tito_2V40.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V40-query.scw
PDB file :
Tito_Scwrl_2V40.pdb
: