Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNYGIPQNAIITIAGTVGVGKSTLTQAL--------------ADKLNFKTSFENVEH--NPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEYGGGFVQD---------RSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVMTPYFPKP---DVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWI---------NSFNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR |
| 1P62 Chain:B ((27-262)) | -----------ISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQST------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASL---NGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWM--NNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE-DFKDKYESL---VEKVKEFLST------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82340 for 1277 contacts (-64.5/contact) +
2D Compatibility (PS) -20125 + (NN) -6132 + (LL) 2000
1D Compatibility (HY) -14800 + (ID) 3000
Total energy: -124397.0 ( -97.41 by residue)
QMean score : 0.507
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