Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIYFSFTG-NVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIG----FGEVPEPVQSFL--EVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
3N3B Chain:C ((23-148))
-QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEF------------
General information:
TITO was launched using:
RESULT:
Template:
3N3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58795 for 893 contacts (-65.8/contact) +
2D Compatibility (PS) -12693 + (NN) -1355 + (LL) 668
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -84075.0 ( -94.15 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_3N3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3B-query.scw
PDB file :
Tito_Scwrl_3N3B.pdb
: