Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
2EQO Chain:A ((82-120))
-------------------------------------------------------------------------------------------------------------KAIDVVVMVSGEPL--LAKPARIVAGHEPERTNELLQIIGK------
General information:
TITO was launched using:
RESULT:
Template:
2EQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20992 for 213 contacts (-98.6/contact) +
2D Compatibility (PS) -4428 + (NN) -2601 + (LL) 9224
1D Compatibility (HY) 800 + (ID) 100
Total energy: -18097.0 ( -84.96 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_2EQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQO-query.scw
PDB file :
Tito_Scwrl_2EQO.pdb
: