Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPA-----RIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN |
3AW8 Chain:A ((12-353)) | ---------------------RMLALAGYPLGLSFRFLDPSPEA-CAGQVGELVVGEFLDEGALLRFAEGLALVTYEFENVPVEAARRLEGRLPLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRRG------QALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGILRLSLAPAPGASEALQKKAEA--YALRAMEALDYVGVLALEFF-QVGEELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPL-GSTAPRGQSAMVNLIGEKPPFAEVLKVEGA--HLHWYGKAVR-PGRKVGHITLRRDGLKALEEGL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117835 for 2740 contacts (-43.0/contact) +
2D Compatibility (PS) -36337 + (NN) -15251 + (LL) 924
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -194349.0 ( -70.93 by residue)
QMean score : 0.438
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