Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKNQPS-AVSQRRMNFEER-----RQIYNNDISEERNSSEVKDKKEQE |
| 2FI7 Chain:A ((80-199)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLY------PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 103500 for 837 contacts (123.7/contact) +
2D Compatibility (PS) -12530 + (NN) -3916 + (LL) 19616
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: 101320.0 ( 121.05 by residue)
QMean score : 0.137
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