Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSL-TLEQI-------KELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
2HVY Chain:A ((47-260)) | ---GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHL--------------------HGDVPEDKIIQVMKEFEGEIIQRPPL---------------------------LRTRKVYYIEVLEIEGRDVLFRVGVEA--GTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAV------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140627 for 1466 contacts (-95.9/contact) +
2D Compatibility (PS) -20882 + (NN) -3262 + (LL) 5764
1D Compatibility (HY) -15600 + (ID) 3900
Total energy: -178507.0 ( -121.76 by residue)
QMean score : 0.488
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