Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDF-AQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEWMLL---------------PMHKGGT----FGKFSTSIGLGMYDR-LAGVKKSERKKMLSKKETLAKEPLVKKE---GLKGGGYYVEYRTDDARLTIEVMKRAAEKG-AEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDV----RSGDYARNNKKLRLTKGVHVVI-DQSKFPLGQAVYFDTEKDGRMIFAIPR-EGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE |
4X9N Chain:A ((39-356)) | --------------------DVLIVGGGVIGCATAYELSQYKLKVTLVEKHHYLAQETSHANSGVIHTGI----------------------DPNPHKLTAKYNILGKKLWLNTYFKRLGFPRQKIRTLIVAFNEMEREQLEVLKQRGIANQINLEDIQMLSKEETLKLEPYVNPEIVAGLKIEGSW----AIDPVLASKCLALAAQQNKVQICTNTEVTNIS----KQVDGTYLVWTNNETTPSFKVKKIIDAAGHYADYLAHLAKADDFEQTTR-----RGQYVVVTNQGELHLNSMVFMVPTIHGKGVIVSPMLDGNFLVGPTALDGVDKEATRYITKDAPCMLTKIGKHMVPSLNINNALI--SFAGSRPI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17662 for 2198 contacts (-8.0/contact) +
2D Compatibility (PS) -30408 + (NN) -1819 + (LL) 18244
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -51495.0 ( -23.43 by residue)
QMean score : 0.361
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