Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
2LX0 Chain:A ((3-27)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTIWEVIAGLVALLTFLAFGFWLFK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13136 for 116 contacts (-113.2/contact) +
2D Compatibility (PS) -2407 + (NN) 527 + (LL) 15424
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -3042.0 ( -26.22 by residue)
QMean score : -0.047
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