Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESR-EGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
1PQX Chain:A ((1-83))
MKIISISETPNHNTMKITLSESREGMT-SDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
General information:
TITO was launched using:
RESULT:
Template:
1PQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41356 for 531 contacts (-77.9/contact) +
2D Compatibility (PS) -8799 + (NN) -2967 + (LL) 52
1D Compatibility (HY) -10800 + (ID) 3950
Total energy: -67820.0 ( -127.72 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1PQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PQX-query.scw
PDB file :
Tito_Scwrl_1PQX.pdb
: