Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKFE
1FXR Chain:A ((1-64))
-ARKFYVDQDECIACESCVEIAPGAFAMDPE-IEKAYVKDVEGASQ------EEVEEAMDTCPVQCIHWEDE----------
General information:
TITO was launched using:
RESULT:
Template:
1FXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40169 for 438 contacts (-91.7/contact) +
2D Compatibility (PS) -7233 + (NN) -6630 + (LL) 964
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -58718.0 ( -134.06 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1FXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FXR-query.scw
PDB file :
Tito_Scwrl_1FXR.pdb
: