Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP
1JO0 Chain:A ((2-96))
TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTIGHILVLYRPSE-EAKIQLP
General information:
TITO was launched using:
RESULT:
Template:
1JO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58222 for 644 contacts (-90.4/contact) +
2D Compatibility (PS) -10274 + (NN) -3613 + (LL) 104
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -82855.0 ( -128.66 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1JO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JO0-query.scw
PDB file :
Tito_Scwrl_1JO0.pdb
: