Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKW-KHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
| 4QA4 Chain:A ((55-356)) | ------------------------------------------------RIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPAT-EGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF-ERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKC---LKYILQWQL--ATLILGGGGYNLANTA-RCWTYLTGVILGKTLSSEIPDREFFTAYGPDYVLEITPSCRPDR--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163390 for 2616 contacts (-62.5/contact) +
2D Compatibility (PS) -32011 + (NN) -11165 + (LL) 5944
1D Compatibility (HY) -16000 + (ID) 4050
Total energy: -220672.0 ( -84.35 by residue)
QMean score : 0.471
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