Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALRNKGIKILPFDANNIKEDMVVIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQIIDQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGD-GTGMGLPES---DY-----FAFEACEYRRHFLSY-----KPDYAIMTNIDFDHPDYFKDINDVFDAFQEMAHNVKKGIIAWG--DDEHLRKIEADVPIY----YYGFKDSDDIYAQNIQITDKGTAFDVYVDGEFYDHFLSPQYGDHTVLNALAVIAI--SYLEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDD-YAHHPREISATIETARKKYPHKEVVAVFQPHTFS-RTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEGASLINEDSINVLEQFDNAVVLFMGAGDIQKLQNAYLDKLGMKNAF |
3ZL8 Chain:A ((25-363)) | ---------------------------VKGKRFDGHDFIDEALRNGAYAIIA-ERKTVNSDRIFL----VESSVDTLAKLAREKL-----GNFSG------TVVGVTGSSGKTTTKEILYNLLKNKRSVFKTPGNMNTEYGLPLSILNDYKGEEILVLEMAASRPGDIAHLCKIAPPDVAVLLNVGSAHLEFFGTRERIMETKMEIIKHSKENAIAVTLFDDPDLRK---EVPRYRNTLFFG-KEGGDSVLKDWWYYEGSTIAEFEAFDSLFTVKLSGYWNGGQLLNIAASLCVMRTLGETVDIFDLA-SLKTVPG---RFNVREKKGVLIVDDTYNASPEAFQTSIE-ALLRFPGKKFAVVGAMKELGERSKEFHEELGERLNVLDGVYV---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108516 for 2431 contacts (-44.6/contact) +
2D Compatibility (PS) -34257 + (NN) -11242 + (LL) 8868
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -167997.0 ( -69.11 by residue)
QMean score : 0.383
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