Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIG----------NGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
4J5H Chain:A ((35-192)) | -------------------------------------------LNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILP-KMTEEDRIVNILKRVGYEPDDLLYIISSHLHWDHA------GGNGAFTNTPIIVQRTEYEAAL-----HREEYMKECILPHLNYKII-EGDYEVVPGVQLLYTPGHSPGHQSLFIETEQSGSVLL---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51736 for 1091 contacts (-47.4/contact) +
2D Compatibility (PS) -15988 + (NN) -4880 + (LL) 7368
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -79886.0 ( -73.22 by residue)
QMean score : 0.513
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