Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLKNFFIGLSNNSFLNNAAKKVGPRLGANKVVAGNTIPELINTIEYLNDKNIAVTVDNLGEFVGTVEES----NHAKEQILTIMDALHQHGV--KAHMSVKLSQLGAEFD--------LELAYQNLREILLKANTYNNMHINIDTEKYASLQQIVQVL------DRLKGEFRNVGTVIQAYLYDSHKLVDKYQD---------LRLRLVKGAYKENE-----------SIAFQSKEDVDANYIKIIEQRL-LNARNFTSIATHDHRIINHVKQFMKENHIEKDRMEFQMLYGFRSELAEEIANEGYN--FTIYVPYGD--DWFAYFMRRLAERPQNLSLAVKEFVKPAGLKRVGIIAALGATVMLGLSTIKKLCRK |
| 4Q71 Chain:A ((157-490)) | --------------------ATRQAMRLMGNHFVLGETIEQALERGKP--GQKTRYSFDMLGEGARTAADARRYFDAYASAIETIGKAAGNHALPDRPGISVKLSALHPRFEAISRARVMVELVPQ-LLDLAQRAKAHD-LNFTVDAEEADRLELSLDVIAATLADPSLKG-WDGFGLAIQAYQKRASAVID-YVDALARAHDRKLMVRLVKGAYWDTEIKRAQERGLDGYPVFTRKAMTDLNYVACASKLLALRPRIFPQFATHNALTVATVLE-MAEG---SSGFEFQRLHGMGEALYEQLAKDHADIAYRTYAPVGSHRDLLAYLVRRLLENGANSS-----FVAQAADYRVPVPALL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107665 for 2170 contacts (-49.6/contact) +
2D Compatibility (PS) -30154 + (NN) -3591 + (LL) 3860
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -157950.0 ( -72.79 by residue)
QMean score : 0.348
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