Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDI-KIEKLNVTLNDAAKKQINNYTSQQVSNKKNDA--WRDAS------ATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK |
| 2YGT Chain:A ((11-95)) | ------------------------------------------IRKEENGNVTIITQNNKQIRKYSSTDSATTKSNSKITVDASFVDDKFSSEMTTIISLKGFIPSGRKIFA---LSKYRGVMRWPIKYMV------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16794 for 322 contacts (52.2/contact) +
2D Compatibility (PS) -7338 + (NN) 6097 + (LL) 12696
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: 22149.0 ( 68.79 by residue)
QMean score : 0.166
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