Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNNFPYNGVVSFKD-------ATGFVIGKNTIITNKHVSKDYKVGD--RITAHP---NGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDA--KVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ |
1WCZ Chain:A ((10-211)) | -----------------------------------------QITDTTNGHYAPVTYIQVEATGTFIASGVVVGKDTLLTNKHVV-DATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK-----HIGEVVKPATMSNNAETQVNQNITVTGYP-GDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGG---VPNEFNGAVFINENVRNFLKQNIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59135 for 1572 contacts (-37.6/contact) +
2D Compatibility (PS) -20403 + (NN) -8362 + (LL) 4248
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -99402.0 ( -63.23 by residue)
QMean score : 0.373
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