Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTK-DPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFNYSKTISYTQKSYVSEVD-KQNSKSVKWGVKANEFVTPDGKKSAHDRYLFVQSPNGPTGSAREY-FAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTGIY-----AERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
| 4TW1 Chain:B ((38-310)) | --------------------------------DDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEE--KNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK-------GRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK-SNEKTQFEVTYTRNQDI----LKNRPGIHYAPPILEKNKDG---QRLIVTYEVDWKNKTVKV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32544 for 1852 contacts (-17.6/contact) +
2D Compatibility (PS) -27052 + (NN) -7787 + (LL) 3292
1D Compatibility (HY) -17200 + (ID) 5100
Total energy: -86391.0 ( -46.65 by residue)
QMean score : 0.375
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