Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHNELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTL-AQNKWLVGAIWALVTIVMIAVITASITALLP
4AE0 Chain:A ((209-298))
----------------------------------IRDKTKTKIESLKE-HGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDS-------
General information:
TITO was launched using:
RESULT:
Template:
4AE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4001 for 427 contacts (9.4/contact) +
2D Compatibility (PS) -8694 + (NN) -2037 + (LL) 3780
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -5600.0 ( -13.11 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_4AE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AE0-query.scw
PDB file :
Tito_Scwrl_4AE0.pdb
: