Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDEAKFVLLQLYSIYLGRIDEGMSKHSASYFGSDESSFNAFFLG---FNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMGLIRDLKKLII
2IT5 Chain:A ((17-60))
---------------------------------------NCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12427 for 192 contacts (-64.7/contact) +
2D Compatibility (PS) -4255 + (NN) 358 + (LL) 4756
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -15968.0 ( -83.17 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2IT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IT5-query.scw
PDB file :
Tito_Scwrl_2IT5.pdb
: