Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFGGVVPEVASRHHVEGITTTINEALVDADVSMEDIDAIAVTEGPGLIGALLIGVNAAKALAFAYDKPLIPVHHIAGHIYANHI----EEPLTFPLIALIVSGGHTELV-YMKDHLSFEVIGETRDDAVGEAYDKVARTIGLNYPGGPQVDRLAAEGEDTYSFPRVWLDKDSYDFSFSGLKSAVINQLH-NQRQKNIPIIEANVATSFQNSVVEVLTFKAIQACKEYSVQRLIVAGGVASNKGLRQSLADQCKVNDIQLTIPSPKLCTDNAAMIGVAGHSLYQQGRFADLALNGHSNIDLEEYSAE |
| 2VWB Chain:A ((1-305)) | ----MICLGLEGTAEKTGVGIVTSDGEVLFNKTIM--------------EAADHHAETFPKLIKEAFEVVDKN--EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDPLT-----LYVSGGNTQVIAYVSK--KYRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYT---VKGMDIAFSGLLTAAMRAYDAGERLEDI-------CYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186685 for 2536 contacts (-73.6/contact) +
2D Compatibility (PS) -31290 + (NN) -10280 + (LL) 3752
1D Compatibility (HY) -23600 + (ID) 4800
Total energy: -252903.0 ( -99.73 by residue)
QMean score : 0.466
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