Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHELK
2O0B Chain:A ((52-78))
---SRDTELMLDALQTLGLRVDGVGSELTV---------------
General information:
TITO was launched using:
RESULT:
Template:
2O0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7536 for 115 contacts (-65.5/contact) +
2D Compatibility (PS) -2900 + (NN) -1588 + (LL) 1236
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -13438.0 ( -116.85 by residue)
QMean score : 0.779
(partial model without unconserved sides chains):
PDB file :
Tito_2O0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O0B-query.scw
PDB file :
Tito_Scwrl_2O0B.pdb
: