TITO

Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)

Input alignment information:

Query sequence

MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAKLYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEIE---GVSLFELQANQL--------KTLNHQSGHTIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEG-KLILNQQGRIMETPNGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPK-PGESVGRLV--NVDCKDTVLEYSELDPEVANQ----------FNNANIGIHAFKLGFILNAV------NRELPYHLAIKNLKQLDENFGVIEQPT----LKFELFYFDIFTYG--TSFVTLQVPREEEFSPLKNKEG-KDSVATATEDLRRMGLI

2YQS Chain:A ((83-436))

------------------------------------------------------------------------LSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLN---GEFYKPTEPNGIKLEQFIFDVFPSVELNKFGCLEVDRLDEFSPLKNADGAKNDTPTTCRN-------

General information:

TITO was launched using:	RESULT:
Template: 2YQS.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output	3D Compatibility (PKB) -104923 for 2458 contacts (-42.7/contact) + 2D Compatibility (PS) -34738 + (NN) -18366 + (LL) 6668 1D Compatibility (HY) -29600 + (ID) 6300 Total energy: -187259.0 ( -76.18 by residue) QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_2YQS.pdb:

(Unconserved sides chains are recalculated) :
Sequence: align-2YQS-query.scw
PDB file : Tito_Scwrl_2YQS.pdb: