Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTK-DSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSK-GVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARD---YFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAV-------DRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
| 4TW1 Chain:B ((38-310)) | ---------------------------------DDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK-------GRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKS-NEKTQFEVTYTRNQD-----ILKNRPGIHYAPPILEKNKDG---QRLIVTYEVDWKNKTVKV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49690 for 1799 contacts (-27.6/contact) +
2D Compatibility (PS) -26256 + (NN) -4286 + (LL) 4352
1D Compatibility (HY) -13600 + (ID) 4650
Total energy: -94130.0 ( -52.32 by residue)
QMean score : 0.365
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