Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLS----EHVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYSPNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSLVDTKALLDALDNGVIKGAALDTYEFERK-LFPSDQRGKTPNDPLLESLIDREDVILTPHIAFYTEAAVKNLIVDALDATLDVLQTGDTRLRVN |
| 4PRL Chain:A ((2-316)) | --KIAVFSPSESERKLVAATEKKFGCELKLIDESLSAENVDQVADCDGVLLK---PLGNLDDEIVYKKLADYGIKSIGLRIVGTNTIDFDLAKKYHLTVTNVPVYSPRAIAEMAVTQAMYLNRKIGEFKANMDKGDFTNPDSLISNEIYNKTIGLIGVGHIGSAVAQIFS-AMGAKVLAYDVIYNPEVEPYLTYAD-FDTVLKEADIISLHTPLLKSTENMIGKKQFAEMKNDAILINAARGELVDTAALIEALEKHEIAAAGLDTLAHESSYFFKKVDDAQIPAD--YKKLAAMPNVIVTPHSAYFTKTSVRNMIEISLRDTI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192393 for 2500 contacts (-77.0/contact) +
2D Compatibility (PS) -33557 + (NN) -14543 + (LL) 1468
1D Compatibility (HY) -28800 + (ID) 5750
Total energy: -273575.0 ( -109.43 by residue)
QMean score : 0.528
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