Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQ-----ASQKLGVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEVYQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSS--GLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLPN--MQINAADPGATNTDLV------GDFSNNSKHVSEGIKPIIQLATIGADGPTGTFINGDGEMPW |
4QED Chain:A ((1-215)) | MKKNVLITGGFKGIGKQVALEFLKNDYHVCITSRYFEKEKRIPHLFSSYEENISFYQLDVTDEEQVNEIINKIVKKFGRLDVLVNNAGISLSDGLLTETKTTDFNKMINTNILGTYFCMKYALKHMQKVSCGAIVNISSITGLSGFPY------------SILFGSTKHAVIGLTKGAAVEFADKGIKINAVAPGIIKTETLQKEIDSGEFSEDS---ISSIHPMQKLGT------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78995 for 1507 contacts (-52.4/contact) +
2D Compatibility (PS) -21616 + (NN) -7449 + (LL) 760
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -123750.0 ( -82.12 by residue)
QMean score : 0.511
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