Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKA--EEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKILEDTFDSIKYLLED
2LDB Chain:A ((6-308))----GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGA--------LDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYI-GVMPIRKLVESK------DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLY-GERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLK------------


General information:
TITO was launched using:
RESULT:

Template: 2LDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -190093 for 2485 contacts (-76.5/contact) +
2D Compatibility (PS) -30716 + (NN) -11593 + (LL) 1388
1D Compatibility (HY) -32800 + (ID) 7850
Total energy: -271664.0 ( -109.32 by residue)
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_2LDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LDB-query.scw
PDB file : Tito_Scwrl_2LDB.pdb: