Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF |
| 3AUP Chain:A ((216-323)) | -----------------------------------------------------------DLAFTPLTITLQG--EYNVRVNSIRI---------NQHSVFPL------------GGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCF-NSNKINAYPSVDLVM-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6522 for 512 contacts (-12.7/contact) +
2D Compatibility (PS) -9787 + (NN) -2500 + (LL) 11228
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -14581.0 ( -28.48 by residue)
QMean score : 0.167
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