Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDIYKIEKEENDVEPYGEKDVRFSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTENNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIKAVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQTILTELEETHALYMRRKNMKQYNIFNQ |
| 2V79 Chain:A ((4-87)) | -----QQFIDMQEQGTSTIPNLLLTHYKQLGLNETELILLLKIKMHL--------EKGSYFP----TPNQLQEGMSISVEECTNRLRMFIQKGFLFIEECE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11149 for 480 contacts (-23.2/contact) +
2D Compatibility (PS) -9059 + (NN) -2782 + (LL) 16604
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -9386.0 ( -19.55 by residue)
QMean score : 0.444
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