Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNAL-KKRPLIMGVSALTSFSEEEF--LMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC
1L2U Chain:A ((17-234))
--VVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQ--RGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPAD-YAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQ---------IMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASL
General information:
TITO was launched using:
RESULT:
Template:
1L2U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155271 for 1717 contacts (-90.4/contact) +
2D Compatibility (PS) -22269 + (NN) -6578 + (LL) 832
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -200436.0 ( -116.74 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1L2U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L2U-query.scw
PDB file :
Tito_Scwrl_1L2U.pdb
: