Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVTLINNENNARYEFETIECTRGPKAVDFSKLFETTGFFSYDPGYSSTAGCQSKISYINGKKGELYYRGHRIEDLVAKYKYVDVCRLLLTGELPKNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYSTHQNMHTEEDYQTMARRIVAKIPTLAAICYRNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVGITPLEVEAFDKILTLHADHGQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKDKNDNFKLMGFGHRVYKSYDPRAKILKGLKDELHQKGVKMDERLSEIAAKVEEIALKDEYFIERNLYPNVDFYSGTILRALKIPVRFFTPVFVIGRTVGWCAQLLEHVKSPQARITRPRQVYVGD |
4E6Y Chain:A ((14-420)) | --------EGKAPIELPIMEGSLGTPVIDVRKL-GANGYFTFDPGFLATASCESQITYIDGGKGILLHRGYPIDQLANNADYLEVCYILLYGEAP-TREQYEKFKTTVTRHTMVHEQIASFFHGFRRDAHPMAVMCGVVGALAAFYHDSLDINNDLHREITAYRLLSKMPTLAAMCYKYSTGQPFIYPRNDLSYAENFLHMMFATPCE--------EYEVNPVVARAMDKIFTLHADHEQNASTSTVRLAGSSGANPFACIAAGIASLWGPAHGGANEACLKMLEEIGSVDNIPEYVDRAKDKDDPFRLMGFGHRVYKNYDPRATVMRETCHEV-LKELNIQDPLLDVAMELERIALSDEYFVSKKLYPNVDFYSGIILKAIGIPVSMFTVIFAISRTIGWIAHWNEMHSDPLNRIGRPRQLYTGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219998 for 3211 contacts (-68.5/contact) +
2D Compatibility (PS) -43279 + (NN) -14513 + (LL) 1320
1D Compatibility (HY) -36800 + (ID) 9250
Total energy: -322520.0 ( -100.44 by residue)
QMean score : 0.481
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