Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFEMLYSKIHRATITDANLNYIGSITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGK-ICVNGAAARKVAIGDVVIILAYASMNEDEINTHKPSIVLVDEKNEILEKG
1PT1 Chain:A ((18-131))
MIRTMLQGKLARVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMK---
General information:
TITO was launched using:
RESULT:
Template:
1PT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76411 for 837 contacts (-91.3/contact) +
2D Compatibility (PS) -12139 + (NN) -595 + (LL) 344
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -98601.0 ( -117.80 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1PT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PT1-query.scw
PDB file :
Tito_Scwrl_1PT1.pdb
: