Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSVTLACGNGGKETNALIERVFMPYLKEWIVAFDEDAPKFEASGEYCVSTDSFVITPLIFNGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDK--LFINTTCIGKIIKPGISSRHLQQGQAIILSDTIANHGASLFATRHEIKLKTNLQSDCQLLYPLLKPL--FLSDLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPYPSVVLKNAWGFERILEMPEGELLPRIC |
| 3WJP Chain:A ((57-335)) | -------------------------------------------------TIDGHTVKPLFFPGGDIGRLAVSGTVNDLAVMGAEPIALANSMIIGEGLDMEVLKRVLKSMDETAREVPVPIVTGDTKVVE----DKIEMFVITAGIGIAEHP-VSDAGAKVGDAVLVSGTIGDHGIALMSHREGIAFETELKSDVAPIWDVVKAVAETIGWENIHAMKDPTRAGLSNALNEIARKSNVGILVREADIPIRPEVRAASEMLGISPYDVANEGKVVMVVAREYAEEALEAMRKTEKGRNAAIIGEVIADYRGKVLLETGIGGKRFMEPPEGDPVPRIQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181488 for 2430 contacts (-74.7/contact) +
2D Compatibility (PS) -29205 + (NN) -9117 + (LL) 3180
1D Compatibility (HY) -21600 + (ID) 5150
Total energy: -243380.0 ( -100.16 by residue)
QMean score : 0.450
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