Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVSRFLNAIDPFNLGVLLSRFQIKNGCIYGVCSYKVSKFTPGYEESKARVLNALNILSKHQIWQSNQESVTKVKGTFVFILENDLHLDENSFYKKLLNLIIDNDFFNRSHLVTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNPSR
3PTA Chain:A ((897-948))
-------------------------------------------------------------------------------------------------------------------------HPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKA----
General information:
TITO was launched using:
RESULT:
Template:
3PTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11811 for 260 contacts (-45.4/contact) +
2D Compatibility (PS) -5503 + (NN) -2756 + (LL) 7980
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -14640.0 ( -56.31 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_3PTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PTA-query.scw
PDB file :
Tito_Scwrl_3PTA.pdb
: