Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNVEYHFKRKDNLALITELLNLDLFPIKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI |
| 1IT2 Chain:A ((9-66)) | -------------------------PTLTDGDKKAINKIWPKI---YKEYEQYSLNILLRFLKCFPQAQASFPKFSTKKSNLEQDPEVKHQAVVIFNKVNEIINSMDNQEEIIKSLKDLSQKHKTVFKVDSIWFKELSSIFVSTIDGGAEFEKLFSIICILLRSAY---------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4445 for 256 contacts (17.4/contact) +
2D Compatibility (PS) -6056 + (NN) -3331 + (LL) 7936
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -656.0 ( -2.56 by residue)
QMean score : 0.425
|
|
|